Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864845.1_cds_XP_016516126.1_28401
CDS Infomation

[gene=LOC107832766] [db_xref=GeneID:107832766] [protein=probable pectate lyase P59] [protein_id=XP_016516126.1] [location=complement(join(127848..128063,128548..129083,129184..129333,129424..129677,130109..130308))] [gbkey=CDS]
Sequence

ATGAAAGGACCTAAGGTGATGCATTCGTTCTTCGTTCTATTTTTCATATTTACCGCAATA
ATTCCGAGTTTCTTGGCTCATATTGGAGAGTTCGACGAAGTGTGGAGGAGGAGAGCAGAG
GAAGCCAGAAAGGTCGCTCTCCAAACTTATGAGAGCGAACCTGAAAATGTCACATTAGCA
TTTAACAAACAAGTCCGTGATGCTATGAAGGAATTAAGTGAAGTAATACCAAAGAATGAC
ACAAGAAGGGAGCTAGGTACTAAAAAATACACGGGCCCTTGTATGGTCACAAATCCAATC
GATAAGTGCTGGAGATGTGACCCTAATTGGGCAGACAACAGGAAAAAGCTAGCAGATTGT
GCAATGGGCTTTGGATCCAAGGCCACTGGCGGAAAGGCCGGCAGGTTCTATGTCGTCAAT
GATTCTTCAGATGATTATACCGACCCAAAACCAGGAACCCTACGTCATGCTGTTATTCAA
AAGGAGCCATTGTGGATCATATTTGATAGAGGAATGACCATTAGGCTGCACCAGGAGTTG
ATCATGCAGAGTGATAAAACTATCGATGCTCGTGGGGCTAACGTTCACATTGCTGGTGGC
GCTGGTATCATGATCCAGTATACAAAAAACGTGATTATCCATGGCCTACACATTCATGAC
ATTGTCCAAGGAAATGGTGGCATGGTTAGAGATGCAGTAGACCATATTGGACTACGCACA
ATGAGTGATGGAGATGGCATTTCCATATTTGGTGCGTCCAATATTTGGATTGATCATGTG
TCAATGTGGAATTGCTATGATGGAATTATTGATGCTGTTGAAGGATCCACCGGTATCACC
ATATCAAATGGCCATTTCACAGATCATAATGAGGTGATGTTGTTTGGTGCGAGTGATAGT
TCTTCAATAGATCAACAAATGCAAATTACACTAGCATTCAATCATTTTGGAAAGAGATTG
GTGCAGAGAATGCCGAGGTGCAGATGGGGATACATTCATGTTGTTAATAATGACTATACT
CACTGGAATATGTATGCTATTGGTGGTAGTAAAAATCCTACCATTATTAGCCAGGGTAAT
CGTTTCATTGCTCCTCCTGACATCTTCAAGAAGCAGGTAATTTATCCCCTCTATTTGTTT
AATGGCTATTTGTGCACTTGCCCCTTCATATGTCGCGAATCTGAATTAATCGGGNTATAC
ATGAATGGGGCATATTTTGTTCAATCTGGTGATCCTGATTGGTCAAAGAAACATCAAAAT
CTTTACGATGGAATATCAGCAGCACCAGCAGATCAAGTCACTTGGATTACAAGGTTTGCA
GGGGCACTTGGTTGCAAGGTAGGACAGGCTTGTTAG

Peptide Sequence

PEP ID

XP_016516126.1
PEP Infomation

PREDICTED: probable pectate lyase P59 [Nicotiana tabacum]
Sequence

MKGPKVMHSFFVLFFIFTAIIPSFLAHIGEFDEVWRRRAEEARKVALQTYESEPENVTLA
FNKQVRDAMKELSEVIPKNDTRRELGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADC
AMGFGSKATGGKAGRFYVVNDSSDDYTDPKPGTLRHAVIQKEPLWIIFDRGMTIRLHQEL
IMQSDKTIDARGANVHIAGGAGIMIQYTKNVIIHGLHIHDIVQGNGGMVRDAVDHIGLRT
MSDGDGISIFGASNIWIDHVSMWNCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQQMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKNPTIISQGN
RFIAPPDIFKKQVIYPLYLFNGYLCTCPFICRESELIGXYMNGAYFVQSGDPDWSKKHQN
LYDGISAAPADQVTWITRFAGALGCKVGQAC

Transcript Sequence

Gene sequence data has not been registered.